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CDC5L cell division cycle 5 like [ Corvus cornix cornix ]

Gene ID: 104685480, updated on 3-Aug-2024

Summary

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Gene symbol
CDC5L
Gene description
cell division cycle 5 like
See related
EnsemblRapid:ENSCCCG00025003093
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See CDC5L in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 3 NC_047056.1 (110476694..110508044, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959286.1 (1401220..1429353)

Chromosome 3 - NC_047056.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120411619 Neighboring gene RUNX family transcription factor 2 Neighboring gene SPT3 homolog, SAGA and STAGA complex component Neighboring gene zinc finger protein 493-like Neighboring gene opsin-5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_047056.1 Reference ASM73873v5 Primary Assembly

    Range
    110476694..110508044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039569272.1 → XP_039425206.1  cell division cycle 5-like protein

    Related
    ENSCCCP00025005679.1, ENSCCCT00025006258.1
    Conserved Domains (2) summary
    COG5147
    Location:6 → 303
    REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
    pfam11831
    Location:404 → 656
    Myb_Cef; pre-mRNA splicing factor component
Nucleotide Protein
Heading Accession and Version

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