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INPP5D inositol polyphosphate-5-phosphatase D [ Corvus cornix cornix ]

Gene ID: 104683678, updated on 3-Aug-2024

Summary

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Gene symbol
INPP5D
Gene description
inositol polyphosphate-5-phosphatase D
See related
EnsemblRapid:ENSCCCG00025011699
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See INPP5D in Genome Data Viewer
Location:
chromosome: 9
Exon count:
30
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 9 NC_046339.1 (25298076..25360489)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959145.1 (278556..340927, complement)

Chromosome 9 - NC_046339.1Genomic Context describing neighboring genes Neighboring gene secondary ossification center associated regulator of chondrocyte maturation Neighboring gene neuronal guanine nucleotide exchange factor Neighboring gene neuraminidase 2 Neighboring gene small Cajal body-specific RNA 6 Neighboring gene autophagy related 16 like 1 Neighboring gene small Cajal body-specific RNA 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046339.1 Reference ASM73873v5 Primary Assembly

    Range
    25298076..25360489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010390619.4 → XP_010388921.3  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1

    Conserved Domains (2) summary
    cd09100
    Location:403 → 709
    INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
    cd10343
    Location:1 → 103
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

  2. XM_039557233.1 → XP_039413167.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X2

    Related
    ENSCCCP00025020274.1, ENSCCCT00025024012.1
    Conserved Domains (2) summary
    cd09100
    Location:403 → 709
    INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
    cd10343
    Location:1 → 103
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

  3. XM_010390621.4 → XP_010388923.2  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X3

    Related
    ENSCCCP00025020298.1, ENSCCCT00025024045.1
    Conserved Domains (2) summary
    cd09100
    Location:403 → 709
    INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
    cd10343
    Location:1 → 103
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

  4. XM_039557232.1 → XP_039413166.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1

    Conserved Domains (2) summary
    cd09100
    Location:403 → 709
    INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
    cd10343
    Location:1 → 103
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)
Nucleotide Protein
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