U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DGKD diacylglycerol kinase delta [ Corvus cornix cornix ]

Gene ID: 104683669, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
DGKD
Gene description
diacylglycerol kinase delta
See related
EnsemblRapid:ENSCCCG00025007970
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DGKD in Genome Data Viewer
Location:
chromosome: 9
Exon count:
36
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 9 NC_046339.1 (25411094..25469112)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959145.1 (169702..227402, complement)

Chromosome 9 - NC_046339.1Genomic Context describing neighboring genes Neighboring gene autophagy related 16 like 1 Neighboring gene small Cajal body-specific RNA 6 Neighboring gene S-antigen visual arrestin Neighboring gene coagulation factor IX-like Neighboring gene protein C, inactivator of coagulation factors Va and VIIIa Neighboring gene interacts with SUPT6H, CTD assembly factor 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
diacylglycerol kinase delta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046339.1 Reference ASM73873v5 Primary Assembly

    Range
    25411094..25469112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039556860.1 → XP_039412794.1  diacylglycerol kinase delta isoform X1

    Related
    ENSCCCP00025014002.1, ENSCCCT00025016498.1
    Conserved Domains (6) summary
    cd09575
    Location:1087 → 1151
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:709 → 866
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:265 → 387
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd13274
    Location:1 → 93
    PH_DGK_type2; Type 2 Diacylglycerol kinase Pleckstrin homology (PH) domain
    cd20847
    Location:82 → 166
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:173 → 233
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins

  2. XM_039556859.1 → XP_039412793.1  diacylglycerol kinase delta isoform X1

    Related
    ENSCCCP00025013983.1, ENSCCCT00025016479.1
    Conserved Domains (6) summary
    cd09575
    Location:1087 → 1151
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:709 → 866
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:265 → 387
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd13274
    Location:1 → 93
    PH_DGK_type2; Type 2 Diacylglycerol kinase Pleckstrin homology (PH) domain
    cd20847
    Location:82 → 166
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:173 → 233
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins

  3. XM_019280603.3 → XP_019136148.1  diacylglycerol kinase delta isoform X1

    Conserved Domains (6) summary
    cd09575
    Location:1087 → 1151
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:709 → 866
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:265 → 387
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd13274
    Location:1 → 93
    PH_DGK_type2; Type 2 Diacylglycerol kinase Pleckstrin homology (PH) domain
    cd20847
    Location:82 → 166
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:173 → 233
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins

  4. XM_019280604.3 → XP_019136149.1  diacylglycerol kinase delta isoform X2

    Conserved Domains (5) summary
    cd09575
    Location:1012 → 1076
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:634 → 791
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:190 → 312
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd20847
    Location:7 → 91
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:98 → 158
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins

  5. XM_019280605.3 → XP_019136150.1  diacylglycerol kinase delta isoform X2

    Conserved Domains (5) summary
    cd09575
    Location:1012 → 1076
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:634 → 791
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:190 → 312
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd20847
    Location:7 → 91
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:98 → 158
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins

  6. XM_010390588.4 → XP_010388890.1  diacylglycerol kinase delta isoform X2

    Conserved Domains (5) summary
    cd09575
    Location:1012 → 1076
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:634 → 791
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:190 → 312
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd20847
    Location:7 → 91
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:98 → 158
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins

  7. XM_019280606.3 → XP_019136151.1  diacylglycerol kinase delta isoform X2

    Conserved Domains (5) summary
    cd09575
    Location:1012 → 1076
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:634 → 791
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:190 → 312
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd20847
    Location:7 → 91
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:98 → 158
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.