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UBXN2B UBX domain protein 2B [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104680716, updated on 12-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
Ensembl:ENSRROG00000040171
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 9 NC_044557.1 (30810057..30848083)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010827972.1 (1322434..1363913)

Chromosome 9 - NC_044557.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104680714 Neighboring gene family with sequence similarity 110 member B Neighboring gene tyrosine-protein phosphatase non-receptor type 11 pseudogene Neighboring gene cytochrome P450 7A1 Neighboring gene syndecan binding protein Neighboring gene neutral sphingomyelinase activation associated factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044557.1 Reference ASM756505v1 Primary Assembly

    Range
    30810057..30848083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030937910.1 → XP_030793770.1  UBX domain-containing protein 2B isoform X2

    UniProtKB/TrEMBL
    A0A2K6QWE4
    Conserved Domains (1) summary
    pfam08059
    Location:146 → 178
    SEP; SEP domain

  2. XM_030937909.1 → XP_030793769.1  UBX domain-containing protein 2B isoform X1

    UniProtKB/TrEMBL
    A0A2K6QWC2, A0A2K6QWH4
    Conserved Domains (2) summary
    smart00553
    Location:140 → 232
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd17161
    Location:250 → 331
    UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

RNA

  1. XR_004059293.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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