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CANX calnexin [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104676205, updated on 12-Mar-2024

Summary

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Gene symbol
CANX
Gene description
calnexin
See related
Ensembl:ENSRROG00000034381
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See CANX in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 3 NC_044551.1 (166088198..166122792)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010824257.1 (566227..599119, complement)

Chromosome 3 - NC_044551.1Genomic Context describing neighboring genes Neighboring gene chromosome 3 C5orf60 homolog Neighboring gene uncharacterized LOC104676230 Neighboring gene chibby family member 3 Neighboring gene high mobility group protein B3-like Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene uncharacterized LOC104676226

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calnexin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044551.1 Reference ASM756505v1 Primary Assembly

    Range
    166088198..166122792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030926720.1 → XP_030782580.1  calnexin isoform X1

    UniProtKB/TrEMBL
    A0A2K6PWI9
    Conserved Domains (1) summary
    pfam00262
    Location:149 → 518
    Calreticulin; Calreticulin family

  2. XM_030926721.1 → XP_030782581.1  calnexin isoform X2

    UniProtKB/TrEMBL
    A0A2K6PWI9
    Conserved Domains (1) summary
    pfam00262
    Location:149 → 518
    Calreticulin; Calreticulin family

  3. XM_010380974.2 → XP_010379276.1  calnexin isoform X3

    See identical proteins and their annotated locations for XP_010379276.1

    UniProtKB/TrEMBL
    A0A2K6PWI9, A0A2K6PWJ2
    Related
    ENSRROP00000020895.1
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  4. XM_010380975.2 → XP_010379277.1  calnexin isoform X3

    See identical proteins and their annotated locations for XP_010379277.1

    UniProtKB/TrEMBL
    A0A2K6PWI9, A0A2K6PWJ2
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  5. XM_030926723.1 → XP_030782583.1  calnexin isoform X3

    UniProtKB/TrEMBL
    A0A2K6PWI9, A0A2K6PWJ2
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family
Nucleotide Protein
Heading Accession and Version

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