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OGDH oxoglutarate dehydrogenase [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104671151, updated on 12-Mar-2024

Summary

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Gene symbol
OGDH
Gene description
oxoglutarate dehydrogenase
See related
Ensembl:ENSRROG00000031910
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See OGDH in Genome Data Viewer
Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 6 NC_044554.1 (80095552..80190256)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010816731.1 (722703..817406)

Chromosome 6 - NC_044554.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115898295 Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene transmembrane p24 trafficking protein 4 Neighboring gene zinc finger MIZ-type containing 2 Neighboring gene peptidylprolyl isomerase A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044554.1 Reference ASM756505v1 Primary Assembly

    Range
    80095552..80190256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010374574.2 → XP_010372876.1  LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A2K6PGN5, A0A2K6PGR3
    Related
    ENSRROP00000015693.1
    Conserved Domains (1) summary
    PRK09404
    Location:49 → 1030
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
Nucleotide Protein
Heading Accession and Version

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