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LOC104669120 DNA excision repair protein ERCC-6-like 2 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104669120, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104669120
Gene description
DNA excision repair protein ERCC-6-like 2
See related
Ensembl:ENSRROG00000029000
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Also known as
ERCC6L2
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Genomic context

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See LOC104669120 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 16 NC_044564.1 (91180517..91279548)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010813779.1 (1466071..1560399)

Chromosome 16 - NC_044564.1Genomic Context describing neighboring genes Neighboring gene dual specificity protein phosphatase CDC14B Neighboring gene peroxiredoxin like 2C Neighboring gene protein/nucleic acid deglycase DJ-1 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene hydroxysteroid 17-beta dehydrogenase 3 Neighboring gene solute carrier family 35 member D2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA excision repair protein ERCC-6-like 2
Names
ERCC excision repair 6 like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044564.1 Reference ASM756505v1 Primary Assembly

    Range
    91180517..91279548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030919409.1 → XP_030775269.1  DNA excision repair protein ERCC-6-like 2 isoform X1

    Conserved Domains (3) summary
    COG0553
    Location:1 → 453
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    pfam14773
    Location:917 → 942
    VIGSSK; Helicase-associated putative binding domain, C-terminal
    cl28899
    Location:1 → 173
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  2. XM_030919410.1 → XP_030775270.1  DNA excision repair protein ERCC-6-like 2 isoform X2

    Conserved Domains (3) summary
    COG0553
    Location:2 → 364
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18793
    Location:219 → 345
    SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
    pfam14773
    Location:828 → 853
    VIGSSK; Helicase-associated putative binding domain, C-terminal
Nucleotide Protein
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