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DHX9 DExH-box helicase 9 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104666794, updated on 12-Mar-2024

Summary

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Gene symbol
DHX9
Gene description
DExH-box helicase 9
See related
Ensembl:ENSRROG00000044740
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See DHX9 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
29
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 8 NC_044556.1 (132886460..132935171)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010809119.1 (1630243..1678589)

Chromosome 8 - NC_044556.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115899244 Neighboring gene N-acetylneuraminate pyruvate lyase Neighboring gene uncharacterized LOC104666827 Neighboring gene SHC binding and spindle associated 1 like Neighboring gene natural cytotoxicity triggering receptor 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 3'-5' DNA/RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase A
Names
DEAH-box helicase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044556.1 Reference ASM756505v1 Primary Assembly

    Range
    132886460..132935171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010368925.2 → XP_010367227.1  ATP-dependent RNA helicase A isoform X1

    UniProtKB/TrEMBL
    A0A2K6RQU6, A0A2K6RQV2
    Related
    ENSRROP00000043409.1
    Conserved Domains (4) summary
    COG1643
    Location:381 → 1095
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd17972
    Location:330 → 563
    DEXHc_DHX9; DEXH-box helicase domain of DEAH-box helicase 9
    cd19854
    Location:3 → 71
    DSRM_DHX9_rpt1; first double-stranded RNA binding motif of DEAH box protein 9 (DHX9) and similar proteins
    cd19855
    Location:178 → 252
    DSRM_DHX9_rpt2; second double-stranded RNA binding motif of DEAH box protein 9 (DHX9) and similar proteins

  2. XM_010368926.2 → XP_010367228.1  ATP-dependent RNA helicase A isoform X2

    UniProtKB/TrEMBL
    A0A2K6RQV2, A0A2K6RQW3
    Related
    ENSRROP00000043396.1
    Conserved Domains (3) summary
    COG1643
    Location:167 → 838
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd17972
    Location:116 → 349
    DEXHc_DHX9; DEXH-box helicase domain of DEAH-box helicase 9
    cd19855
    Location:1 → 38
    DSRM_DHX9_rpt2; second double-stranded RNA binding motif of DEAH box protein 9 (DHX9) and similar proteins
Nucleotide Protein
Heading Accession and Version

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