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TDRD12 tudor domain containing 12 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104665246, updated on 12-Mar-2024

Summary

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Gene symbol
TDRD12
Gene description
tudor domain containing 12
See related
Ensembl:ENSRROG00000036351
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See TDRD12 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
34
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 12 NC_044560.1 (100486404..100586142, complement)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010806131.1 (322815..416807, complement)

Chromosome 12 - NC_044560.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 89 Neighboring gene solute carrier family 7 member 9 Neighboring gene uncharacterized LOC115892380 Neighboring gene nudix hydrolase 19 Neighboring gene regulator of G protein signaling 9 binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in germ-line stem cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrotransposon silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative ATP-dependent RNA helicase TDRD12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044560.1 Reference ASM756505v1 Primary Assembly

    Range
    100486404..100586142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010367008.2 → XP_010365310.2  putative ATP-dependent RNA helicase TDRD12 isoform X2

    UniProtKB/TrEMBL
    A0A2K6Q8T6
    Conserved Domains (3) summary
    COG0513
    Location:422 → 854
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    pfam00567
    Location:6 → 128
    TUDOR; Tudor domain
    cl00175
    Location:1189 → 1293
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  2. XM_010367009.2 → XP_010365311.1  putative ATP-dependent RNA helicase TDRD12 isoform X1

    UniProtKB/TrEMBL
    A0A2K6Q8T2
    Related
    ENSRROP00000025187.1
    Conserved Domains (1) summary
    pfam00567
    Location:6 → 128
    TUDOR; Tudor domain
Nucleotide Protein
Heading Accession and Version

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