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ADAR adenosine deaminase RNA specific [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104663489, updated on 12-Mar-2024

Summary

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Gene symbol
ADAR
Gene description
adenosine deaminase RNA specific
See related
Ensembl:ENSRROG00000033822
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See ADAR in Genome Data Viewer
Location:
chromosome: 8
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 8 NC_044556.1 (42556401..42605591)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010802960.1 (571362..600888)

Chromosome 8 - NC_044556.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115899045 Neighboring gene potassium calcium-activated channel subfamily N member 3 Neighboring gene cholinergic receptor nicotinic beta 2 subunit Neighboring gene ubiquitin conjugating enzyme E2 Q1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA-specific adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
double-stranded RNA-specific adenosine deaminase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044556.1 Reference ASM756505v1 Primary Assembly

    Range
    42556401..42605591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030936753.1 → XP_030792613.1  double-stranded RNA-specific adenosine deaminase isoform X3

    UniProtKB/TrEMBL
    A0A2K6PT28
    Conserved Domains (5) summary
    smart00552
    Location:847 → 1230
    ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
    pfam02295
    Location:144 → 210
    z-alpha; Adenosine deaminase z-alpha domain
    cd19913
    Location:510 → 580
    DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
    cd19914
    Location:621 → 691
    DSRM_DRADA_rpt2; second double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
    cd19915
    Location:733 → 803
    DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins

  2. XM_010364684.2 → XP_010362986.1  double-stranded RNA-specific adenosine deaminase isoform X1

    UniProtKB/TrEMBL
    A0A2K6PT25, A0A2K6PT28
    Related
    ENSRROP00000019679.1
    Conserved Domains (5) summary
    smart00552
    Location:838 → 1221
    ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
    pfam02295
    Location:135 → 201
    z-alpha; Adenosine deaminase z-alpha domain
    cd19913
    Location:501 → 571
    DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
    cd19915
    Location:724 → 794
    DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
    cl00054
    Location:612 → 682
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  3. XM_010364685.2 → XP_010362987.1  double-stranded RNA-specific adenosine deaminase isoform X2

    UniProtKB/TrEMBL
    A0A2K6PT28
    Conserved Domains (5) summary
    smart00552
    Location:812 → 1195
    ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
    pfam02295
    Location:135 → 201
    z-alpha; Adenosine deaminase z-alpha domain
    cd19913
    Location:501 → 571
    DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
    cd19914
    Location:612 → 682
    DSRM_DRADA_rpt2; second double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
    cd19915
    Location:724 → 794
    DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
Nucleotide Protein
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