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RAD54L RAD54 like [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104662118, updated on 12-Mar-2024

Summary

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Gene symbol
RAD54L
Gene description
RAD54 like
See related
Ensembl:ENSRROG00000020844
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See RAD54L in Genome Data Viewer
Location:
chromosome: 12
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 12 NC_044560.1 (123123094..123155318)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010798746.1 (713596..745402, complement)

Chromosome 12 - NC_044560.1Genomic Context describing neighboring genes Neighboring gene protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) Neighboring gene leucine rich adaptor protein 1 Neighboring gene leucine rich repeat containing 41 Neighboring gene cytochrome b-c1 complex subunit 6, mitochondrial Neighboring gene sperm head and tail associated protein-like Neighboring gene NOP2/Sun RNA methyltransferase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA translocase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via synthesis-dependent strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair and recombination protein RAD54-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044560.1 Reference ASM756505v1 Primary Assembly

    Range
    123123094..123155318
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030912907.1 → XP_030768767.1  DNA repair and recombination protein RAD54-like isoform X1

    UniProtKB/TrEMBL
    A0A2K6NL93
    Conserved Domains (2) summary
    COG0553
    Location:97 → 665
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18067
    Location:153 → 395
    DEXHc_RAD54A; DEXH-box helicase domain of RAD54A

  2. XM_030912908.1 → XP_030768768.1  DNA repair and recombination protein RAD54-like isoform X2

    Conserved Domains (2) summary
    COG0553
    Location:1 → 485
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cl28899
    Location:1 → 215
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  3. XM_010363031.2 → XP_010361333.1  DNA repair and recombination protein RAD54-like isoform X1

    UniProtKB/TrEMBL
    A0A2K6NL93
    Related
    ENSRROP00000005048.1
    Conserved Domains (2) summary
    COG0553
    Location:97 → 665
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18067
    Location:153 → 395
    DEXHc_RAD54A; DEXH-box helicase domain of RAD54A
Nucleotide Protein
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