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PLCB2 phospholipase C beta 2 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104659669, updated on 12-Mar-2024

Summary

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Gene symbol
PLCB2
Gene description
phospholipase C beta 2
See related
Ensembl:ENSRROG00000018725
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See PLCB2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
32
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 5 NC_044553.1 (67925678..67946482)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010793230.1 (353351..373924)

Chromosome 5 - NC_044553.1Genomic Context describing neighboring genes Neighboring gene 60S acidic ribosomal protein P0 pseudogene Neighboring gene InaF motif containing 2 Neighboring gene ankyrin repeat domain 63 Neighboring gene p21 (RAC1) activated kinase 6 Neighboring gene PAK6 antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044553.1 Reference ASM756505v1 Primary Assembly

    Range
    67925678..67946482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030930636.1 → XP_030786496.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X3

    UniProtKB/TrEMBL
    A0A2K6NJY0
    Conserved Domains (5) summary
    cd00275
    Location:677 → 798
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08624
    Location:312 → 645
    PI-PLCc_beta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2
    cd16209
    Location:149 → 299
    EFh_PI-PLCbeta2; EF-hand motif found in phosphoinositide phospholipase C beta 2 (PI-PLC-beta2)
    pfam08703
    Location:975 → 1149
    PLC-beta_C; PLC-beta C terminal
    pfam17787
    Location:13 → 141
    PH_14; PH domain

  2. XM_030930634.1 → XP_030786494.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1

    UniProtKB/TrEMBL
    A0A2K6NJY0
    Conserved Domains (6) summary
    cd00275
    Location:677 → 798
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08624
    Location:312 → 645
    PI-PLCc_beta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2
    COG5281
    Location:803 → 1107
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
    cd16209
    Location:149 → 299
    EFh_PI-PLCbeta2; EF-hand motif found in phosphoinositide phospholipase C beta 2 (PI-PLC-beta2)
    pfam08703
    Location:960 → 1134
    PLC-beta_C; PLC-beta C terminal
    pfam17787
    Location:13 → 141
    PH_14; PH domain

  3. XM_030930635.1 → XP_030786495.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X2

    UniProtKB/TrEMBL
    A0A2K6NJY0
    Conserved Domains (6) summary
    cd00275
    Location:659 → 780
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08624
    Location:312 → 627
    PI-PLCc_beta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2
    COG5281
    Location:785 → 1089
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
    cd16209
    Location:149 → 299
    EFh_PI-PLCbeta2; EF-hand motif found in phosphoinositide phospholipase C beta 2 (PI-PLC-beta2)
    pfam08703
    Location:942 → 1116
    PLC-beta_C; PLC-beta C terminal
    pfam17787
    Location:13 → 141
    PH_14; PH domain

RNA

  1. XR_004057314.1 RNA Sequence

  2. XR_004057315.1 RNA Sequence

Nucleotide Protein
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