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SC5D sterol-C5-desaturase [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104657234, updated on 12-Mar-2024

Summary

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Gene symbol
SC5D
Gene description
sterol-C5-desaturase
See related
Ensembl:ENSRROG00000036199
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See SC5D in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 15 NC_044563.1 (81577328..81595458)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010830239.1 (2319187..2332870)

Chromosome 15 - NC_044563.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor E like Neighboring gene tectorin alpha Neighboring gene decreased expression in renal and prostate cancer protein-like Neighboring gene sortilin related receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process via lathosterol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lathosterol oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044563.1 Reference ASM756505v1 Primary Assembly

    Range
    81577328..81595458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010357008.2 → XP_010355310.1  lathosterol oxidase

    UniProtKB/TrEMBL
    A0A2K6Q7R6
    Related
    ENSRROP00000024815.1
    Conserved Domains (1) summary
    COG3000
    Location:34 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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