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FBXO17 F-box protein 17 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 104650106, updated on 12-Mar-2024

Summary

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Gene symbol
FBXO17
Gene description
F-box protein 17
See related
EnsemblRapid:ENSSBOG00000032009
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See FBXO17 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100963.1 (38644104..38682991, complement)

NW_024100963.1Genomic Context describing neighboring genes Neighboring gene coiled-coil glutamate rich protein 2 Neighboring gene seryl-tRNA synthetase 2, mitochondrial Neighboring gene mitochondrial ribosomal protein S12 Neighboring gene F-box protein 27 Neighboring gene ATP synthase subunit g, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100963 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100963.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    38644104..38682991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039466803.1 → XP_039322737.1  F-box only protein 17

    UniProtKB/TrEMBL
    A0A2K6TXC0
    Related
    ENSSBOP00000024330.1, ENSSBOT00000041190.2
    Conserved Domains (2) summary
    pfam04300
    Location:103 → 276
    FBA; F-box associated region
    pfam12937
    Location:20 → 61
    F-box-like

RNA

  1. XR_005578604.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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