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GALNT8 polypeptide N-acetylgalactosaminyltransferase 8 [ Balearica regulorum gibbericeps (East African grey crowned-crane) ]

Gene ID: 104643040, updated on 3-Aug-2024

Summary

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Gene symbol
GALNT8
Gene description
polypeptide N-acetylgalactosaminyltransferase 8
Locus tag
N312_01007
Gene type
protein coding
RefSeq status
MODEL
Organism
Balearica regulorum gibbericeps (sub-species: gibbericeps)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Balearica
Orthologs
human mouse all
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Genomic context

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See GALNT8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM70989v1 (GCF_000709895.1) Unplaced Scaffold NW_010738566.1 (31449..52566)

NW_010738566.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010738566.1 Unplaced Scaffold Reference ASM70989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable polypeptide N-acetylgalactosaminyltransferase 8
Names
putative polypeptide N-acetylgalactosaminyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Balearica regulorum gibbericeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70989v1 Primary Assembly

Genomic

  1. NW_010738566.1 Reference ASM70989v1 Primary Assembly

    Range
    31449..52566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010312230.1 → XP_010310532.1  probable polypeptide N-acetylgalactosaminyltransferase 8

    UniProtKB/TrEMBL
    A0A087V534
    Conserved Domains (4) summary
    cd02510
    Location:141 → 442
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:455 → 581
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:454 → 579
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:138 → 384
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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