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LOC104609701 uncharacterized LOC104609701 [ Nelumbo nucifera (sacred lotus) ]

Gene ID: 104609701, updated on 15-Nov-2019

Summary

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Gene symbol
LOC104609701
Gene description
uncharacterized LOC104609701
Gene type
protein coding
RefSeq status
MODEL
Organism
Nelumbo nucifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo
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Genomic context

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See LOC104609701 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Chinese Lotus 1.1 (GCF_000365185.1) Unplaced Scaffold NW_010729161.1 (1136916..1141329, complement)

NW_010729161.1Genomic Context describing neighboring genes Neighboring gene L-type lectin-domain containing receptor kinase V.9 Neighboring gene uncharacterized LOC109115585 Neighboring gene uncharacterized mitochondrial protein AtMg00820-like Neighboring gene 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010729161.1 Unplaced Scaffold Reference Chinese Lotus 1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC104609701

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nelumbo nucifera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chinese Lotus 1.1 Primary Assembly

Genomic

  1. NW_010729161.1 Reference Chinese Lotus 1.1 Primary Assembly

    Range
    1136916..1141329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010276072.1 → XP_010274374.1  uncharacterized protein LOC104609701

    UniProtKB/TrEMBL
    A0A1U8BCN7
    Conserved Domains (4) summary
    pfam03732
    Location:100 → 171
    Retrotrans_gag; Retrotransposon gag protein
    cd09272
    Location:820 → 945
    RNase_HI_RT_Ty1; Ty1/Copia family of RNase HI in long-term repeat retroelements
    pfam07727
    Location:596 → 785
    RVT_2; Reverse transcriptase (RNA-dependent DNA polymerase)
    pfam14244
    Location:39 → 185
    UBN2_3; gag-polypeptide of LTR copia-type
Nucleotide Protein
Heading Accession and Version

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