U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NGLY1 N-glycanase 1 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104580841, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NGLY1
Gene description
N-glycanase 1
Locus tag
N309_05737
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NGLY1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010578583.1 (42728..60996)

NW_010578583.1Genomic Context describing neighboring genes Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial Neighboring gene DNA topoisomerase II beta Neighboring gene retinoic acid receptor beta

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010578583.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
Names
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010578583.1 Reference ASM70537v2

    Range
    42728..60996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010228390.1 → XP_010226692.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

    UniProtKB/TrEMBL
    A0A099YVZ1
    Conserved Domains (5) summary
    COG1305
    Location:269 → 330
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam01841
    Location:251 → 330
    Transglut_core; Transglutaminase-like superfamily
    pfam03835
    Location:314 → 411
    Rad4; Rad4 transglutaminase-like domain
    pfam04721
    Location:433 → 628
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl15262
    Location:27 → 89
    PUB; PNGase/UBA or UBX (PUB) domain of p97 adaptor proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.