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SORD sorbitol dehydrogenase [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104580188, updated on 19-Jun-2024

Summary

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Gene symbol
SORD
Gene description
sorbitol dehydrogenase
Locus tag
N309_05616
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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See SORD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010578108.1 (372005..390047)

NW_010578108.1Genomic Context describing neighboring genes Neighboring gene ornithine decarboxylase antizyme 2 Neighboring gene RNA binding protein, mRNA processing factor 2 Neighboring gene dual oxidase 2 Neighboring gene dual oxidase maturation factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010578108.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-iditol 2-dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sorbitol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorbitol dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010578108.1 Reference ASM70537v2

    Range
    372005..390047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010227648.1 → XP_010225950.1  sorbitol dehydrogenase

    UniProtKB/TrEMBL
    A0A099YZE2
    Conserved Domains (2) summary
    cd05285
    Location:10 → 337
    sorbitol_DH; Sorbitol dehydrogenase
    COG1063
    Location:10 → 336
    Tdh; Threonine dehydrogenase or related Zn-dependent dehydrogenase [Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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