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SACM1L SAC1 like phosphatidylinositide phosphatase [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104580124, updated on 12-Mar-2024

Summary

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Gene symbol
SACM1L
Gene description
SAC1 like phosphatidylinositide phosphatase
Locus tag
N309_09033
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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See SACM1L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010578097.1 (59362..86090, complement)

NW_010578097.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 20 Neighboring gene small nuclear ribonucleoprotein Sm D1-like Neighboring gene LIM domain containing 1 Neighboring gene leucyl-tRNA synthetase 2, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010578097.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositide phosphatase SAC1
Names
Phosphatidylinositide phosphatase SAC1
SAC1 suppressor of actin mutations 1 like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010578097.1 Reference ASM70537v2

    Range
    59362..86090 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010227577.1 → XP_010225879.1  phosphatidylinositide phosphatase SAC1

    UniProtKB/TrEMBL
    A0A099YZ92
    Conserved Domains (2) summary
    COG5329
    Location:109 → 571
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam02383
    Location:110 → 397
    Syja_N; SacI homology domain
Nucleotide Protein
Heading Accession and Version

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