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OXCT1 3-oxoacid CoA-transferase 1 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104575164, updated on 12-Mar-2024

Summary

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Gene symbol
OXCT1
Gene description
3-oxoacid CoA-transferase 1
Locus tag
N309_09892
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See OXCT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010587099.1 (9981..70228)

NW_010587099.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010587099.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinyl-CoA:3-oxo-acid CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ketone body catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010587099.1 Reference ASM70537v2

    Range
    9981..70228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010222498.1 → XP_010220800.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A099ZJN2
    Conserved Domains (3) summary
    COG1788
    Location:15 → 248
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    COG4670
    Location:22 → 488
    YdiF; Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid transport and metabolism]
    cl00339
    Location:273 → 481
    SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...
Nucleotide Protein
Heading Accession and Version

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