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PYGB glycogen phosphorylase B [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104570657, updated on 12-Mar-2024

Summary

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Gene symbol
PYGB
Gene description
glycogen phosphorylase B
Locus tag
N309_13989
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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See PYGB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010583628.1 (63184..76274, complement)

NW_010583628.1Genomic Context describing neighboring genes Neighboring gene testis specific serine kinase 4 Neighboring gene abhydrolase domain containing 12, lysophospholipase Neighboring gene uncharacterized LOC104570658

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010583628.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, brain form
Names
Glycogen phosphorylase, brain form
phosphorylase, glycogen; brain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010583628.1 Reference ASM70537v2

    Range
    63184..76274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010217689.1 → XP_010215991.1  glycogen phosphorylase, brain form

    See identical proteins and their annotated locations for XP_010215991.1

    UniProtKB/TrEMBL
    A0A099ZA67
    Conserved Domains (2) summary
    cd04300
    Location:29 → 828
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
    TIGR02093
    Location:32 → 828
    P_ylase; glycogen/starch/alpha-glucan phosphorylases
Nucleotide Protein
Heading Accession and Version

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