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AGA aspartylglucosaminidase [ Colius striatus (speckled mousebird) ]

Gene ID: 104560010, updated on 3-Aug-2024

Summary

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Gene symbol
AGA
Gene description
aspartylglucosaminidase
Locus tag
N325_01628
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See AGA in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 3 NC_084761.1 (61674861..61692057, complement)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010702111.1 (40..14149)

Chromosome 3 - NC_084761.1Genomic Context describing neighboring genes Neighboring gene vascular endothelial growth factor C Neighboring gene nei like DNA glycosylase 3 Neighboring gene teneurin transmembrane protein 3 Neighboring gene dCMP deaminase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084761.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    61674861..61692057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061992703.1 → XP_061848687.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X2

  2. XM_061992702.1 → XP_061848686.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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