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MTM1 myotubularin 1 [ Colius striatus (speckled mousebird) ]

Gene ID: 104556185, updated on 3-Aug-2024

Summary

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Gene symbol
MTM1
Gene description
myotubularin 1
Locus tag
N325_04631
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See MTM1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 13 NC_084771.1 (5768087..5810395)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010685635.1 (12173..39364)

Chromosome 13 - NC_084771.1Genomic Context describing neighboring genes Neighboring gene EOLA-like protein Neighboring gene mastermind like domain containing 1 Neighboring gene myotubularin related protein 1 Neighboring gene CD99 molecule like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell cellular homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084771.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    5768087..5810395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062006509.1 → XP_061862493.1  myotubularin isoform X1

    UniProtKB/TrEMBL
    A0A091K3N4

  2. XM_062006508.1 → XP_061862492.1  myotubularin isoform X1

    UniProtKB/TrEMBL
    A0A091K3N4

  3. XM_062006512.1 → XP_061862496.1  myotubularin isoform X2

  4. XM_062006510.1 → XP_061862494.1  myotubularin isoform X1

    UniProtKB/TrEMBL
    A0A091K3N4

  5. XM_062006511.1 → XP_061862495.1  myotubularin isoform X1

    UniProtKB/TrEMBL
    A0A091K3N4

  6. XM_062006513.1 → XP_061862497.1  myotubularin isoform X3

Nucleotide Protein
Heading Accession and Version

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