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YIPF6 Yip1 domain family member 6 [ Colius striatus (speckled mousebird) ]

Gene ID: 104552845, updated on 3-Aug-2024

Summary

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Gene symbol
YIPF6
Gene description
Yip1 domain family member 6
Locus tag
N325_09382
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See YIPF6 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 13 NC_084771.1 (7049670..7056542)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010670932.1 (85..3967)

Chromosome 13 - NC_084771.1Genomic Context describing neighboring genes Neighboring gene androgen receptor Neighboring gene oligophrenin 1 Neighboring gene StAR related lipid transfer domain containing 8 Neighboring gene relaxin receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein YIPF6
Names
Protein YIPF6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084771.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    7049670..7056542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062006348.1 → XP_061862332.1  protein YIPF6 isoform X2

  2. XM_062006347.1 → XP_061862331.1  protein YIPF6 isoform X1

  3. XM_062006349.1 → XP_061862333.1  protein YIPF6 isoform X3

  4. XM_062006350.1 → XP_061862334.1  protein YIPF6 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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