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PXYLP1 2-phosphoxylose phosphatase 1 [ Colius striatus (speckled mousebird) ]

Gene ID: 104551259, updated on 3-Aug-2024

Summary

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Gene symbol
PXYLP1
Gene description
2-phosphoxylose phosphatase 1
Locus tag
N325_11575
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See PXYLP1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 12 NC_084770.1 (4120688..4173750)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010670070.1 (16531..51709)

Chromosome 12 - NC_084770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133626401 Neighboring gene solute carrier family 25 member 36 Neighboring gene uncharacterized LOC133626428 Neighboring gene EPH receptor A4 Neighboring gene kininogen 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-phosphoxylose phosphatase 1
Names
Acid phosphatase-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084770.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    4120688..4173750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062005440.1 → XP_061861424.1  2-phosphoxylose phosphatase 1 isoform X2

  2. XM_062005444.1 → XP_061861428.1  2-phosphoxylose phosphatase 1 isoform X3

  3. XM_062005442.1 → XP_061861426.1  2-phosphoxylose phosphatase 1 isoform X2

  4. XM_062005441.1 → XP_061861425.1  2-phosphoxylose phosphatase 1 isoform X2

  5. XM_062005443.1 → XP_061861427.1  2-phosphoxylose phosphatase 1 isoform X2

  6. XM_062005439.1 → XP_061861423.1  2-phosphoxylose phosphatase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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