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LOC104549827 lysozyme g [ Colius striatus (speckled mousebird) ]

Gene ID: 104549827, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104549827
Gene description
lysozyme g
Locus tag
N325_00211
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Also known as
LYG2
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Genomic context

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See LOC104549827 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 1 NC_084759.1 (66460843..66465677)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010662902.1 (7529..10823, complement)

Chromosome 1 - NC_084759.1Genomic Context describing neighboring genes Neighboring gene lysozyme g Neighboring gene lysozyme g Neighboring gene mitochondrial ribosomal protein L30 Neighboring gene microtubule interacting and trafficking domain containing 1 Neighboring gene lipoyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidoglycan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysozyme g
Names
lysozyme g2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084759.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    66460843..66465677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010204028.2 → XP_010202330.2  lysozyme g

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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