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NSUN2 NOP2/Sun RNA methyltransferase 2 [ Colius striatus (speckled mousebird) ]

Gene ID: 104549800, updated on 3-Aug-2024

Summary

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Gene symbol
NSUN2
Gene description
NOP2/Sun RNA methyltransferase 2
Locus tag
N325_06815
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See NSUN2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 4 NC_084762.1 (23268314..23344482)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010669369.1 (9159..29135, complement)

Chromosome 4 - NC_084762.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 2 Neighboring gene terminal nucleotidyltransferase 4A Neighboring gene steroid 5 alpha-reductase 1 Neighboring gene ubiquitin conjugating enzyme E2 QL1 Neighboring gene mediator complex subunit 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA (cytidine-5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA cytosine C(5)-methyltransferase NSUN2
Names
NOP2/Sun RNA methyltransferase family member 2
tRNA (cytosine(34)-C(5))-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084762.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    23268314..23344482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061994621.1 → XP_061850605.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  2. XM_061994626.1 → XP_061850610.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  3. XM_061994623.1 → XP_061850607.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  4. XM_061994628.1 → XP_061850612.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  5. XM_061994633.1 → XP_061850617.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X2

  6. XM_061994625.1 → XP_061850609.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  7. XM_061994631.1 → XP_061850615.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  8. XM_061994627.1 → XP_061850611.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  9. XM_061994622.1 → XP_061850606.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  10. XM_061994629.1 → XP_061850613.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  11. XM_061994630.1 → XP_061850614.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

  12. XM_061994632.1 → XP_061850616.1  RNA cytosine C(5)-methyltransferase NSUN2 isoform X1

RNA

  1. XR_009818590.1 RNA Sequence

  2. XR_009818591.1 RNA Sequence

Nucleotide Protein
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