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POFUT2 protein O-fucosyltransferase 2 [ Colius striatus (speckled mousebird) ]

Gene ID: 104549468, updated on 3-Aug-2024

Summary

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Gene symbol
POFUT2
Gene description
protein O-fucosyltransferase 2
Locus tag
N325_08842
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See POFUT2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 9 NC_084767.1 (21360332..21375835, complement)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010709769.1 (937..6313, complement)

Chromosome 9 - NC_084767.1Genomic Context describing neighboring genes Neighboring gene SLX9 ribosome biogenesis factor Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene adenosine deaminase RNA specific B1 Neighboring gene minichromosome maintenance complex component 3 associated protein Neighboring gene transfer RNA serine (anticodon GCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084767.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    21360332..21375835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062002510.1 → XP_061858494.1  GDP-fucose protein O-fucosyltransferase 2 isoform X1

  2. XM_062002513.1 → XP_061858497.1  GDP-fucose protein O-fucosyltransferase 2 isoform X2

  3. XM_062002514.1 → XP_061858498.1  GDP-fucose protein O-fucosyltransferase 2 isoform X3

  4. XM_062002515.1 → XP_061858499.1  GDP-fucose protein O-fucosyltransferase 2 isoform X4

RNA

  1. XR_009819262.1 RNA Sequence

  2. XR_009819263.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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