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LOC104549123 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 [ Colius striatus (speckled mousebird) ]

Gene ID: 104549123, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104549123
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
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Genomic context

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See LOC104549123 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 18 NC_084776.1 (10991877..11018721, complement)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010725254.1 (153..734, complement)

Chromosome 18 - NC_084776.1Genomic Context describing neighboring genes Neighboring gene tektin-3 Neighboring gene peripheral myelin protein 22 Neighboring gene protoheme IX farnesyltransferase, mitochondrial Neighboring gene uncharacterized LOC133627198

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1
Names
Heparan sulfate glucosamine 3-O-sulfotransferase 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084776.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    10991877..11018721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062011010.1 → XP_061866994.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1

Nucleotide Protein
Heading Accession and Version

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