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SPHK1 sphingosine kinase 1 [ Mesitornis unicolor (brown roatelo) ]

Gene ID: 104547277, updated on 3-Aug-2024

Summary

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Gene symbol
SPHK1
Gene description
sphingosine kinase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesitornis unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Mesitornithiformes; Mesitornithidae; Mesitornis
Orthologs
human mouse all
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Genomic context

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See SPHK1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM69576v1 (GCF_000695765.1) Unplaced Scaffold NW_010209500.1 (65890..67916, complement)

NW_010209500.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 O

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010209500.1 Unplaced Scaffold Reference ASM69576v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesitornis unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69576v1

Genomic

  1. NW_010209500.1 Reference ASM69576v1

    Range
    65890..67916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010192895.1 → XP_010191197.1  sphingosine kinase 1

    Conserved Domains (1) summary
    pfam00781
    Location:1 → 115
    DAGK_cat; Diacylglycerol kinase catalytic domain
Nucleotide Protein
Heading Accession and Version

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