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LOC104520896 lactosylceramide 4-alpha-galactosyltransferase [ Antrostomus carolinensis (chuck-will's-widow) ]

Gene ID: 104520896, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104520896
Gene description
lactosylceramide 4-alpha-galactosyltransferase
Locus tag
N321_04073
Gene type
protein coding
RefSeq status
MODEL
Organism
Antrostomus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Antrostomus
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Genomic context

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See LOC104520896 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM70074v1 (GCF_000700745.1) Unplaced Scaffold NW_010299192.1 (6467..7582)

NW_010299192.1Genomic Context describing neighboring genes Neighboring gene poly(U)-specific endoribonuclease-A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010299192 Unplaced Scaffold Reference ASM70074v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Antrostomus carolinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70074v1

Genomic

  1. NW_010299192.1 Reference ASM70074v1

    Range
    6467..7582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010162712.1 → XP_010161014.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A094MJ68
    Conserved Domains (2) summary
    pfam04488
    Location:95 → 214
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:226 → 344
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
Heading Accession and Version

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