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LOC104506714 kin of IRRE-like protein 3 [ Eurypyga helias (sunbittern) ]

Gene ID: 104506714, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104506714
Gene description
kin of IRRE-like protein 3
Locus tag
N326_04927
Gene type
protein coding
RefSeq status
MODEL
Organism
Eurypyga helias
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Phaethontimorphae; Eurypygiformes; Eurypygidae; Eurypyga
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC104506714 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM69077v1 (GCF_000690775.1) Unplaced Scaffold NW_010238132.1 (429..47281, complement)

NW_010238132.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010238132.1 Unplaced Scaffold Reference ASM69077v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
Kin of IRRE-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eurypyga helias Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69077v1

Genomic

  1. NW_010238132.1 Reference ASM69077v1

    Range
    429..47281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010147753.1 → XP_010146055.1  kin of IRRE-like protein 3

    UniProtKB/TrEMBL
    A0A093IPR9
    Conserved Domains (6) summary
    cd05759
    Location:31 → 112
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:284 → 381
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:215 → 266
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:292 → 381
    IG_like; Immunoglobulin like
    pfam07679
    Location:201 → 282
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:120 → 197
    Ig_2; Immunoglobulin domain
Nucleotide Protein
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