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AGPS alkylglycerone phosphate synthase [ Buceros rhinoceros silvestris ]

Gene ID: 104492359, updated on 3-Aug-2024

Summary

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Gene symbol
AGPS
Gene description
alkylglycerone phosphate synthase
Locus tag
N320_11009
Gene type
protein coding
RefSeq status
MODEL
Organism
Buceros rhinoceros silvestris (sub-species: silvestris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Bucerotidae; Buceros
Orthologs
human mouse all
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Genomic context

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See AGPS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM71030v1 (GCF_000710305.1) Unplaced Scaffold NW_010408600.1 (35241..78878, complement)

NW_010408600.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010408600.1 Unplaced Scaffold Reference ASM71030v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylglycerone-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkyldihydroxyacetonephosphate synthase, peroxisomal
Names
Alkyldihydroxyacetonephosphate synthase, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Buceros rhinoceros silvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM71030v1

Genomic

  1. NW_010408600.1 Reference ASM71030v1

    Range
    35241..78878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010134906.1 → XP_010133208.1  alkyldihydroxyacetonephosphate synthase, peroxisomal

    UniProtKB/TrEMBL
    A0A091H2G3
    Conserved Domains (3) summary
    COG0277
    Location:78 → 530
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:84 → 225
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:263 → 530
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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