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ABAT 4-aminobutyrate aminotransferase [ Chlamydotis macqueenii (Macqueen's bustard) ]

Gene ID: 104486069, updated on 18-Sep-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
Locus tag
N324_07569
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlamydotis macqueenii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Chlamydotis
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM69519v1 (GCF_000695195.1) Unplaced Scaffold NW_010501176.1 (4628..26058, complement)

NW_010501176.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 186

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010501176.1 Unplaced Scaffold Reference ASM69519v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlamydotis macqueenii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69519v1

Genomic

  1. NW_010501176.1 Reference ASM69519v1

    Range
    4628..26058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010128624.1 → XP_010126926.1  4-aminobutyrate aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A091L2N2
    Conserved Domains (2) summary
    COG0160
    Location:42 → 497
    GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
    cl18945
    Location:34 → 496
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
Heading Accession and Version

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