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TMTC1 transmembrane O-mannosyltransferase targeting cadherins 1 [ Chlamydotis macqueenii (Macqueen's bustard) ]

Gene ID: 104476426, updated on 12-Mar-2024

Summary

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Gene symbol
TMTC1
Gene description
transmembrane O-mannosyltransferase targeting cadherins 1
Locus tag
N324_02794
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlamydotis macqueenii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gruiformes; Otididae; Chlamydotis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See TMTC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM69519v1 (GCF_000695195.1) Unplaced Scaffold NW_010463843.1 (33900..106524, complement)

NW_010463843.1Genomic Context describing neighboring genes Neighboring gene ovochymase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010463843.1 Unplaced Scaffold Reference ASM69519v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 1
Names
Transmembrane and TPR repeat-containing protein 1
transmembrane and tetratricopeptide repeat containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlamydotis macqueenii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69519v1

Genomic

  1. NW_010463843.1 Reference ASM69519v1

    Range
    33900..106524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010116221.1 → XP_010114523.1  transmembrane and TPR repeat-containing protein 1

    UniProtKB/TrEMBL
    A0A091KKD7
    Conserved Domains (5) summary
    COG0457
    Location:287 → 558
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:268 → 296
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:1 → 51
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:168 → 231
    TPR_11; TPR repeat
    pfam13428
    Location:375 → 412
    TPR_14; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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