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IDH1 isocitrate dehydrogenase (NADP(+)) 1 [ Pterocles gutturalis (yellow-throated sandgrouse) ]

Gene ID: 104469717, updated on 3-Aug-2024

Summary

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Gene symbol
IDH1
Gene description
isocitrate dehydrogenase (NADP(+)) 1
Locus tag
N339_09368
Gene type
protein coding
RefSeq status
MODEL
Organism
Pterocles gutturalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Pterocliformes; Pteroclidae; Pterocles
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See IDH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM69924v1 (GCF_000699245.1) Unplaced Scaffold NW_010142356.1 (164..6802)

NW_010142356.1Genomic Context describing neighboring genes Neighboring gene shugoshin-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010142356.1 Unplaced Scaffold Reference ASM69924v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP] cytoplasmic
Names
Isocitrate dehydrogenase [NADP] cytoplasmic
isocitrate dehydrogenase (NADP(+)) 1, cytosolic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pterocles gutturalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69924v1

Genomic

  1. NW_010142356.1 Reference ASM69924v1

    Range
    164..6802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010084329.1 → XP_010082631.1  isocitrate dehydrogenase [NADP] cytoplasmic

    UniProtKB/TrEMBL
    A0A093ENC8
    Conserved Domains (1) summary
    cl00445
    Location:1 → 274
    Iso_dh; Isocitrate/isopropylmalate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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