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LOC104468573 aspartyl/asparaginyl beta-hydroxylase-like [ Pterocles gutturalis (yellow-throated sandgrouse) ]

Gene ID: 104468573, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104468573
Gene description
aspartyl/asparaginyl beta-hydroxylase-like
Locus tag
N339_06240
Gene type
protein coding
RefSeq status
MODEL
Organism
Pterocles gutturalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Pterocliformes; Pteroclidae; Pterocles
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC104468573 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ASM69924v1 (GCF_000699245.1) Unplaced Scaffold NW_010137945.1 (926..64711)

NW_010137945.1Genomic Context describing neighboring genes Neighboring gene clavesin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010137945.1 Unplaced Scaffold Reference ASM69924v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase-like
Names
Aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pterocles gutturalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69924v1

Genomic

  1. NW_010137945.1 Reference ASM69924v1

    Range
    926..64711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010082761.1 → XP_010081063.1  LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase-like

    Conserved Domains (3) summary
    sd00006
    Location:402 → 426
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:535 → 688
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:283 → 353
    TPR_16; Tetratricopeptide repeat
Nucleotide Protein
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