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TMTC1 transmembrane O-mannosyltransferase targeting cadherins 1 [ Pterocles gutturalis (yellow-throated sandgrouse) ]

Gene ID: 104467982, updated on 3-Aug-2024

Summary

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Gene symbol
TMTC1
Gene description
transmembrane O-mannosyltransferase targeting cadherins 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pterocles gutturalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Pterocliformes; Pteroclidae; Pterocles
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM69924v1 (GCF_000699245.1) Unplaced Scaffold NW_010135629.1 (22904..36539, complement)

NW_010135629.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010135629.1 Unplaced Scaffold Reference ASM69924v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 1
Names
transmembrane and tetratricopeptide repeat containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pterocles gutturalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69924v1

Genomic

  1. NW_010135629.1 Reference ASM69924v1

    Range
    22904..36539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010081969.1 → XP_010080271.1  transmembrane and TPR repeat-containing protein 1

    Conserved Domains (6) summary
    sd00006
    Location:36 → 64
    TPR; TPR repeat [structural motif]
    pfam07719
    Location:206 → 238
    TPR_2; Tetratricopeptide repeat
    pfam13414
    Location:36 → 101
    TPR_11; TPR repeat
    pfam13424
    Location:106 → 169
    TPR_12; Tetratricopeptide repeat
    pfam13428
    Location:143 → 180
    TPR_14; Tetratricopeptide repeat
    pfam14559
    Location:151 → 214
    TPR_19; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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