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ACOD1 aconitate decarboxylase 1 [ Pterocles gutturalis (yellow-throated sandgrouse) ]

Gene ID: 104466032, updated on 3-Aug-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
Locus tag
N339_11393
Gene type
protein coding
RefSeq status
MODEL
Organism
Pterocles gutturalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Pterocliformes; Pteroclidae; Pterocles
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ACOD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM69924v1 (GCF_000699245.1) Unplaced Scaffold NW_010127681.1 (1388..5479)

NW_010127681.1Genomic Context describing neighboring genes Neighboring gene ES1 protein homolog, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010127681.1 Unplaced Scaffold Reference ASM69924v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase
Names
Cis-aconitate decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pterocles gutturalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69924v1

Genomic

  1. NW_010127681.1 Reference ASM69924v1

    Range
    1388..5479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010079334.1 → XP_010077636.1  cis-aconitate decarboxylase

    UniProtKB/TrEMBL
    A0A093EBI3
    Conserved Domains (1) summary
    pfam03972
    Location:7 → 389
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein
Heading Accession and Version

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