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LOC104456417 xyloglucan endotransglucosylase/hydrolase protein 9 [ Eucalyptus grandis ]

Gene ID: 104456417, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104456417
Gene description
xyloglucan endotransglucosylase/hydrolase protein 9
Locus tag
EUGRSUZ_H00619
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104456417 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 8 NC_052619.1 (10613420..10615345)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092445.1 (8364827..8366649)

Chromosome 8 - NC_052619.1Genomic Context describing neighboring genes Neighboring gene rhodanese-like domain-containing protein 8, chloroplastic Neighboring gene nascent polypeptide-associated complex subunit beta Neighboring gene tetratricopeptide repeat protein 1 Neighboring gene uncharacterized LOC120286254

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan endotransglucosylase/hydrolase protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052619.1 Reference ASM1654582v1 Primary Assembly

    Range
    10613420..10615345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010071199.3 → XP_010069501.2  xyloglucan endotransglucosylase/hydrolase protein 9

    UniProtKB/TrEMBL
    A0A059AWR3
    Conserved Domains (1) summary
    cd02176
    Location:43 → 302
    GH16_XET; Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16
Nucleotide Protein
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