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LOC104452009 mannan endo-1,4-beta-mannosidase 5 [ Eucalyptus grandis ]

Gene ID: 104452009, updated on 19-Jun-2024

Summary

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Gene symbol
LOC104452009
Gene description
mannan endo-1,4-beta-mannosidase 5
Locus tag
EUGRSUZ_F02943
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104452009 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 6 NC_052617.1 (41101821..41103651)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092443.1 (39095746..39097528)

Chromosome 6 - NC_052617.1Genomic Context describing neighboring genes Neighboring gene endoglucanase 3 Neighboring gene mannan endo-1,4-beta-mannosidase 5-like Neighboring gene molybdopterin synthase sulfur carrier subunit Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannan endo-1,4-beta-mannosidase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052617.1 Reference ASM1654582v1 Primary Assembly

    Range
    41101821..41103651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010066548.3 → XP_010064850.2  mannan endo-1,4-beta-mannosidase 5

    UniProtKB/TrEMBL
    A0A059BU49
    Conserved Domains (1) summary
    COG3934
    Location:39 → 376
    COG3934; Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
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