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LOC104450066 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 [ Eucalyptus grandis ]

Gene ID: 104450066, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104450066
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
Locus tag
EUGRSUZ_F03232
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104450066 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 6 NC_052617.1 (43461582..43483948, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092443.1 (41528036..41550646, complement)

Chromosome 6 - NC_052617.1Genomic Context describing neighboring genes Neighboring gene bidirectional sugar transporter SWEET2 Neighboring gene trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Neighboring gene NADH kinase Neighboring gene E3 ubiquitin-protein ligase CCNB1IP1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052617.1 Reference ASM1654582v1 Primary Assembly

    Range
    43461582..43483948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010064474.3 → XP_010062776.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A059BUH5
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 921
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  2. XM_010064472.3 → XP_010062774.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A059BUH5
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 921
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  3. XM_039315679.1 → XP_039171613.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A059BUH5
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 921
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  4. XM_010064471.3 → XP_010062773.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A059BUH5
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 921
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  5. XM_010064470.3 → XP_010062772.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A059BUH5
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 921
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  6. XM_010064473.3 → XP_010062775.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A059BUH5
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 921
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

RNA

  1. XR_005552219.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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