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LOC104448737 arabinosyltransferase RRA3 [ Eucalyptus grandis ]

Gene ID: 104448737, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104448737
Gene description
arabinosyltransferase RRA3
Locus tag
EUGRSUZ_F01547
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104448737 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 6 NC_052617.1 (18711413..18713899, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092443.1 (19880576..19883080, complement)

Chromosome 6 - NC_052617.1Genomic Context describing neighboring genes Neighboring gene lysophospholipid acyltransferase LPEAT1-like Neighboring gene J domain-containing protein required for chloroplast accumulation response 1 Neighboring gene cytochrome P450 734A1 Neighboring gene uncharacterized LOC108960349

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase RRA3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052617.1 Reference ASM1654582v1 Primary Assembly

    Range
    18711413..18713899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010062622.3 → XP_010060924.2  arabinosyltransferase RRA3

    UniProtKB/TrEMBL
    A0A059BNY6
    Conserved Domains (1) summary
    pfam03407
    Location:191 → 413
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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