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LOC104443551 mitochondrial carnitine/acylcarnitine carrier-like protein [ Eucalyptus grandis ]

Gene ID: 104443551, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104443551
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
EUGRSUZ_E00280
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104443551 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 5 NC_052616.1 (2791886..2795512, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092442.1 (2685799..2689403, complement)

Chromosome 5 - NC_052616.1Genomic Context describing neighboring genes Neighboring gene abscisic acid receptor PYR1 Neighboring gene uncharacterized LOC104443550 Neighboring gene uncharacterized LOC104443552 Neighboring gene flap endonuclease GEN-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052616.1 Reference ASM1654582v1 Primary Assembly

    Range
    2791886..2795512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010057020.3 → XP_010055322.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    See identical proteins and their annotated locations for XP_010055322.1

    UniProtKB/TrEMBL
    A0A059BZZ2
    Conserved Domains (1) summary
    pfam00153
    Location:212 → 298
    Mito_carr; Mitochondrial carrier protein

  2. XM_018874082.2 → XP_018729627.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A059BZZ2

  3. XM_010057021.3 → XP_010055323.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    See identical proteins and their annotated locations for XP_010055323.1

    UniProtKB/TrEMBL
    A0A059BZZ2
    Conserved Domains (1) summary
    pfam00153
    Location:212 → 298
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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