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LOC104443393 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [ Eucalyptus grandis ]

Gene ID: 104443393, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104443393
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Locus tag
EUGRSUZ_E00084
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104443393 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 5 NC_052616.1 (785545..789176, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092442.1 (766005..769548, complement)

Chromosome 5 - NC_052616.1Genomic Context describing neighboring genes Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene acidic endochitinase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052616.1 Reference ASM1654582v1 Primary Assembly

    Range
    785545..789176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010056765.3 → XP_010055067.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    See identical proteins and their annotated locations for XP_010055067.1

    UniProtKB/TrEMBL
    A0A059BZA3
    Conserved Domains (1) summary
    pfam03407
    Location:117 → 336
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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