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LOC104437291 glycogen synthase [ Eucalyptus grandis ]

Gene ID: 104437291, updated on 18-Sep-2024

Summary

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Gene symbol
LOC104437291
Gene description
glycogen synthase
Locus tag
EUGRSUZ_C02159
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104437291 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 3 NC_052614.1 (33982367..34001432, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092440.1 (39034461..39053504, complement)

Chromosome 3 - NC_052614.1Genomic Context describing neighboring genes Neighboring gene chloroplast envelope membrane protein Neighboring gene uncharacterized LOC108958563 Neighboring gene beta-amyrin 28-monooxygenase Neighboring gene beta-amyrin 28-monooxygenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052614.1 Reference ASM1654582v1 Primary Assembly

    Range
    33982367..34001432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010050211.3 → XP_010048513.1  glycogen synthase isoform X1

    See identical proteins and their annotated locations for XP_010048513.1

    UniProtKB/TrEMBL
    A0A059CQY2, A0A059CRF8
    Conserved Domains (2) summary
    cd03791
    Location:116 → 613
    GT1_Glycogen_synthase_DULL1_like; This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family ...
    TIGR02095
    Location:115 → 614
    glgA; glycogen/starch synthase, ADP-glucose type

  2. XM_018870930.2 → XP_018726475.1  glycogen synthase isoform X3

    UniProtKB/TrEMBL
    A0A059CRF8

  3. XM_018870929.2 → XP_018726474.1  glycogen synthase isoform X2

    UniProtKB/TrEMBL
    A0A059CRF8

RNA

  1. XR_005549639.1 RNA Sequence

  2. XR_005549640.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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