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LOC104425999 diacylglycerol kinase 1 [ Eucalyptus grandis ]

Gene ID: 104425999, updated on 18-Sep-2024

Summary

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Gene symbol
LOC104425999
Gene description
diacylglycerol kinase 1
Locus tag
EUGRSUZ_K02507
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104425999 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 11 NC_052622.1 (32027400..32035161, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092448.1 (32261112..32269536, complement)

Chromosome 11 - NC_052622.1Genomic Context describing neighboring genes Neighboring gene pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 Neighboring gene UDP-glucose 6-dehydrogenase 1 Neighboring gene 40S ribosomal protein S19-3 Neighboring gene UDP-glycosyltransferase 83A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: diacylglycerol kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052622.1 Reference ASM1654582v1 Primary Assembly

    Range
    32027400..32035161 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010038915.3 → XP_010037217.2  LOW QUALITY PROTEIN: diacylglycerol kinase 1

    UniProtKB/TrEMBL
    A0A059A6B9
    Conserved Domains (4) summary
    smart00046
    Location:362 → 488
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    pfam00609
    Location:506 → 663
    DAGK_acc; Diacylglycerol kinase accessory domain
    cd20805
    Location:169 → 213
    C1_DGK_rpt2; second protein kinase C conserved region 1 (C1 domain) found in the diacylglycerol kinase family
    cl03205
    Location:228 → 289
    Jacalin_like; Jacalin-like lectin domain
Nucleotide Protein
Heading Accession and Version

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