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LOC104424841 diacylglycerol kinase 5 [ Eucalyptus grandis ]

Gene ID: 104424841, updated on 18-Sep-2024

Summary

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Gene symbol
LOC104424841
Gene description
diacylglycerol kinase 5
Locus tag
EUGRSUZ_K00904
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104424841 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 11 NC_052622.1 (11184464..11190172)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092448.1 (11087028..11092791)

Chromosome 11 - NC_052622.1Genomic Context describing neighboring genes Neighboring gene coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1 Neighboring gene coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1 Neighboring gene diacylglycerol kinase 5-like Neighboring gene uncharacterized LOC104424842 Neighboring gene uncharacterized LOC120289533

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052622.1 Reference ASM1654582v1 Primary Assembly

    Range
    11184464..11190172
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010037353.3 → XP_010035655.2  diacylglycerol kinase 5

    UniProtKB/TrEMBL
    A0A058ZZW1
    Conserved Domains (3) summary
    cl15240
    Location:129 → 193
    Reelin_subrepeat_like; Tandem repeat subunit of reelin and related proteins
    pfam00609
    Location:232 → 404
    DAGK_acc; Diacylglycerol kinase accessory domain
    pfam00781
    Location:37 → 153
    DAGK_cat; Diacylglycerol kinase catalytic domain
Nucleotide Protein
Heading Accession and Version

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