U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC104424514 soluble starch synthase 1, chloroplastic/amyloplastic [ Eucalyptus grandis ]

Gene ID: 104424514, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC104424514
Gene description
soluble starch synthase 1, chloroplastic/amyloplastic
Locus tag
EUGRSUZ_K00387
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC104424514 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 11 NC_052622.1 (4049026..4056129)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092448.1 (4507674..4514909)

Chromosome 11 - NC_052622.1Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like Neighboring gene uncharacterized LOC120289546 Neighboring gene structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 Neighboring gene phytolongin Phyl2.1 Neighboring gene photosystem I reaction center subunit III, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
soluble starch synthase 1, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052622.1 Reference ASM1654582v1 Primary Assembly

    Range
    4049026..4056129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010036972.3 → XP_010035274.2  soluble starch synthase 1, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A058ZZQ6
    Conserved Domains (1) summary
    cd03791
    Location:149 → 573
    GT5_Glycogen_synthase_DULL1-like; Glycogen synthase GlgA and similar proteins

RNA

  1. XR_005547857.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases