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LOC104424458 hevamine-A [ Eucalyptus grandis ]

Gene ID: 104424458, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104424458
Gene description
hevamine-A
Locus tag
EUGRSUZ_K00311
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104424458 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 11 NC_052622.1 (3320100..3321195)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092448.1 (3739037..3740154)

Chromosome 11 - NC_052622.1Genomic Context describing neighboring genes Neighboring gene hevamine-A-like Neighboring gene protein CURVATURE THYLAKOID 1A, chloroplastic-like Neighboring gene protein CURVATURE THYLAKOID 1A, chloroplastic-like Neighboring gene WD repeat-containing protein 91 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hevamine-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052622.1 Reference ASM1654582v1 Primary Assembly

    Range
    3320100..3321195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010036890.3 → XP_010035192.2  hevamine-A

    UniProtKB/TrEMBL
    A0A058ZYH3
    Conserved Domains (1) summary
    cd02877
    Location:29 → 299
    GH18_hevamine_XipI_class_III; This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that ...
Nucleotide Protein
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